BioCosm
io.github.nhoverte/biocosm · 1.0.0
Biotech intelligence for AI agents: drugs, targets, diagnostics, PoS estimates, and writeups.
Nobody here has read this server's code, because it publishes none. The description above is the maker's own, from the registry. A connection test shows whether it answers and what tools it says it has; it never calls a tool, so it cannot show what one does with your data.
Where it sits in the directory's order
What can be seen from outside, weighed as the directory publishes.
Observable signals: 30 of 100 points (at most 60 here)
| Input | Points | What was seen |
|---|---|---|
| Source published | held at 0 | No entry here publishes source: that is what puts it in this directory. |
| Licence stated | held at 0 | With no files, there is nothing for a licence to be stated in or held against. |
| Advisory state | held at 0 | Advisory databases index packages, and these entries publish none, so there is nothing to look up. |
| Auth declared | 0 of 15 | The registry entry declares no key. That is what it declares, not a finding that it has no protection. |
| Latest connection test reached it | 20 of 20 |
Where it answers
https://biocosm-mcp.fly.dev/mcpstreamable-http
Connection test
The MCP handshake, then a request for the tool list, with no key and no data of yours. Run nightly, and by anyone, at most once every ten minutes per server.
It completed the handshake and listed 13 tools.
- Protocol
- 2025-06-18
- Calls itself
- BioCosm 3.4.4
- Handshake time
- 28 ms
- HTTP status
- 200
The tools it lists (13, as of 8 days ago)
The tool-description rules found nothing in these descriptions. They look for instructions aimed at a model and for hidden characters; they cannot see what a tool does when it runs.
search_nodesSearch BioCosm nodes by name, gene symbol, target, therapeutic area, or company. Results are ranked: exact name/brand matches first, then partial name matches, with a node-type prior (canonical drug/diagnostic nodes rank above gene-target nodes, which rank above ChEMBL salt-form duplicates). Nodes matched only via description/company/area rank last. Each result includes a `name` field for disambiguation.
get_nodeGet full details for a single BioCosm node: identity and all name aliases, classification, gene targets and mechanism, therapeutic areas, companies, revenue history where available (sparse: ~100 drugs, mostly blockbusters, as annualized quarterly estimates; source links when present), probability-of- success predictions for pipeline drugs (with confidence intervals and contributing factors), structured clinical trial outcomes, external cross-references, and writeup availability. Empty fields mean "not in BioCosm's coverage," NOT zero or absent in reality.
get_writeupGet the full writeup for a BioCosm node, including all sections, citations, structured data, and validation score.
list_by_therapeutic_areaList all nodes in a given therapeutic area.
get_company_portfolioGet a company's full drug/diagnostic portfolio from BioCosm.
get_statsGet a high-level overview of the BioCosm database: total nodes, writeups, companies, breakdowns by type/status/domain, validation scores, and recent pipeline runs.
get_staleness_reportGet writeup staleness report: overall stats, top stale nodes, data source freshness.
How this entry becomes a listing
For the maker. The catalogue lists what it can read, and this server publishes nothing to read yet. There are two routes, and only the first is open today.
Publish the source Open today
- Put the server's source in a public repository on github.com, with a licence.
- Keep a server.json in that repository naming this server,
io.github.nhoverte/biocosm, and declare the repository in it:"repository": { "url": "https://github.com/owner/repo", "source": "github" }, adding"subfolder"when the server lives in a folder. - Publish that version to the official MCP registry.
- The nightly registry sweep records the declaration. This page stays, dated, and says the source is declared but not yet read.
- The catalogue reads declared repositories at a pinned commit, in batches run by hand, and lists the servers that meet the batch's rules (among them a server.json at that commit naming the server, an https endpoint and a licence). When it lists this server, this page links to the listing. There is no schedule, so no date can be promised.
List it through the maker studio Not open yet
From the official MCP registry, last updated there 114 days ago. The registry entry · biocosm.io